Step IV: After jobs have finished
Table of Contents
Step 3.1. Merge the results and provenance
Once all jobs have finished, the results will be on different branches.
Please use babs-merge
to merge the results and provenance
from all the successfully finished jobs:
babs-merge \
--project-root /path/to/my_BABS_project
See babs-merge: Merge results and provenance for details.
If babs-merge
finishes successfully, you'll see:
`babs-merge` was successful!
Otherwise, there were some warnings or errors.
Step 3.2. Get the results
Now you can get the results out by cloning the output RIA:
datalad clone \
ria+file:///absolute/path/to/my_BABS_project/output_ria#~data \
my_BABS_project_outputs
Please replace /absolute/path/to/my_BABS_project
with the full path to your BABS project root directory.
Here my_BABS_project_outputs
is an example clone of the output RIA.
Now, in my_BABS_project_outputs
, you should be able to see zip files containing the results
for all subjects (and sessions). You can access the contents of one zip file via:
datalad get zip_file_name.zip
And you can unzip it via:
unzip zip_file_name.zip