babs status: Check job status

Command-Line Arguments

Check job status in a BABS project.

usage: babs status [-h] [PATH]

Positional Arguments

PATH

Absolute path to the root of BABS project. For example, '/path/to/my_BABS_project/' (default is current working directory).

Warning

Do NOT kill babs status while it's running! Otherwise, new job IDs may not be captured or saved into the job_status.csv!

Example commands

Basic use

When only providing the required argument project_root, you'll only get job status summary (i.e., number of jobs finished/pending/running/failed):

cd /path/to/my_BABS_project
babs status

Job resubmission

After running babs status, you might see that some jobs are pending or failed, and you'd like to resubmit them.

Run this (in BABS project root) to resubmit all the failed jobs:

babs submit